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 graph  java  visualization  framework  bioinformatics  gui  opensource

Discover From This Page & Topic: [] graph
 [] Hypergraph - Hyperbolic graphs and trees : Home http://hypergraph.sourceforge.net/ (graph tools graphing hyperbolic)
 [] Charts And Graphs: Modern Solutions http://www.smashingmagazine.com/2007/10/18/charts-and-graphs-modern-solutions/ (javascript opensource tools design)
 [] Graphviz http://www.graphviz.org/ (tools visualization graphics graph)
 [] Graph Gear http://www.creativesynthesis.net/blog/projects/graph-gear/ (javascript graph visualization opensource)
 [] Graphical visualization of text similarities in essays in a book | munterbund.de http://www.munterbund.de/visualisierung_textaehnlichkeiten/essay.html#Implementationcriteria (graph visualization design)
 [] prefuse | A Java-based toolkit for building interactive information visualization applications. http://prefuse.org/ (visualization java graph network)
 [] HyperTree Java Library http://hypertree.sourceforge.net/ (visualization java visualisation tree)
 [] Pajek http://www.ccsr.ac.uk/methods/publications/snacourse/pajek.html (pajek networks sociology graphing)
 [] The Spiral of PKM 2.0 (new graph) « What is in the UnWorkshop … http://ursfrei.wordpress.com/2006/11/05/the-spiral-of-pkm-20-new-graph/ (visualization pkm graphe visualisation)
 [] Sparkline PHP Graphing Library http://sparkline.org/ (visualization php sparklines chart)
 [] flexvizgraphlib - Google Code http://code.google.com/p/flexvizgraphlib/ (visualization flex actionscript tree)
 [] XML/SWF Charts > Introduction http://www.maani.us/xml_charts/index.php (flash charts xml chart)
 [] jsviz - Google Code http://code.google.com/p/jsviz/ (javascript code visualization opensource)
 [] Good Stuff for Rails Newbies | Gruff Update With Bar Graphs http://nubyonrails.com/articles/2005/10/26/gruff-update-with-bar-graphs (graphing ruby rubyonrails libraries)
 [] OF - Explorez visuellement vos tags del.icio.us avec Sixpli http://www.outilsfroids.net/news/explorer-visuellement-vos-tags-del-icio-us-avec-sixpli (tag del.icio.us mapping map)
 [] WireIt - a Javascript Wiring Library http://javascript.neyric.com/wireit/ (javascript visualization pipes yui)
 [] Social graph - Wikipedia, the free encyclopedia http://en.wikipedia.org/wiki/Social_graph (socialnetworking community socialnetworks networking)
 [] Comparer les courbes de buzz avec le CaptuCourbes | Je véronise... http://gambette.blogspot.com/2008/01/comparer-les-courbes-de-buzz-avec-le.html (outil windows .fr tool)
 [] graphwise http://www.graphwise.com/ (statistics visualization search data)

 [] yFiles AJAX - Graph viewer, collapsible tree, graph editor in Javascript http://live.yworks.com/yfiles-ajax/ (graph ajax tree javascript)
 [] PHPBuilder.com, the best resource for PHP tutorials, templates, PHP manuals, content management ... http://www.phpbuilder.com/columns/allan20000830.php3 (graphing php graphs)
 [] Levitated | Levitated Daily Source, the good source http://levitated.net/daily/index.html (flash visualization design opensource)
 [] Track-n-Graph - Home http://www.trackngraph.com/www/ (sharing collaboration tools chart)
 [] flare | visualization on the web http://flare.prefuse.org/ (visualization flash library design)
 [] Visualizing Del.icio.us Roundup http://www.solutionwatch.com/252/visualizing-delicious-roundup/ (del.icio.us visualisation delicious tools)
 [] Représentations graphiques d'un thésaurus : une cartographie sémantique http://dossierdoc.typepad.com/descripteurs/2008/02/reprsentations.html (billet visualization sémantique .fr)
 [] jsTechnorati 0.2 : extension Firefox offrant une interface graphique d'interrogation des API de ... http://web-mining.fr/blog/%5Buser%5D/jstechnorati_0.2 (outil extraction flem csv)
 [] OF - Graphwise, un service de recherche et de représentation graphique de données + plugin ... http://www.outilsfroids.net/news/graphwise-un-service-de-recherche-et-de-representation-graphique-de ... (mashup outil .fr tool)
 [] Your Contacts, the Webby Way - knowee http://knowee.org/ (semanticweb social microformats aggregator)
 [] Cloudalicious - Watching Tag Clouds Over Time http://cloudalicio.us/tagcloud.php?url=http://cloudalicio.us/ (outil tool tag del.icio.us)
 [] TouchGraph | Home http://www.touchgraph.com/ (google visualization search tools)
 [] Many Eyes http://services.alphaworks.ibm.com/manyeyes/app (visualization data collaboration chart)
 [] Social Graph API: One small step for Google, one giant step for the Internet Operating System http://radar.oreilly.com/archives/2008/02/google_social_graph_api.html (google social socialsoftware api)
 [] Exploratree - Exploratree by FutureLab http://www.exploratree.org.uk/ (tools visualization thinking mindmapping)
 [] Websites as graphs - an HTML DOM Visualizer Applet http://www.aharef.info/static/htmlgraph/ (tools visualization html net)
 [] flickr graph - marcos weskamp http://www.marumushi.com/apps/flickrgraph/ (flickr social flash photography)
 [] Creating Graphs in PHP - B. Adam (Howell) http://www.benjaminadam.com/archives/2005/05/13/creating-graphs-in-php (php graphics dataviz graphs)
 [] visualcomplexity.com | A visual exploration on mapping complex networks http://visualcomplexity.com/vc/ (visualization art maps design)
 [] Swivel http://www.swivel.com/ (statistics webapp economics compare)
 [] JpGraph - PHP Graph Creating Library http://www.aditus.nu/jpgraph/ (php library visualization programming)
 [] Networks / Pajek http://vlado.fmf.uni-lj.si/pub/networks/pajek/ (network visualization statistics research)
 [] Dijkstra's algorithm http://en.giswiki.net/wiki/Dijkstra's_algorithm (php gis route graph)
 [] Storing Hierarchical Data in a Database [PHP & MySQL Tutorials] http://www.sitepoint.com/article/hierarchical-data-database (programming tree mysql php)
 [] prefuse | interactive information visualization http://prefuse.sourceforge.net/ (java visualization tools graphs)
 [] Announcement: new Javascript/Canvas Graph library http://aslakhellesoy.com/articles/2006/02/09/announcement-new-javascript-canvas-graph-library (javascript library graph canvas)
 [] i should be coding :: Supporting Hierarchical Data Sets http://ishouldbecoding.com/2007/09/16/supporting-hierarchical-data-sets/ (tree graph database php)
 [] Bellman-Ford algorithm - Wikipedia, the free encyclopedia http://en.wikipedia.org/wiki/Bellman-Ford_algorithm (algorithm document for graph)
 [] SIMILE | Timeplot http://simile.mit.edu/timeplot/ (ajax chart javascript canvas)
 [] The Zoomable Visual Transformation Machine http://zvtm.sourceforge.net/ (visualization java programming macosx)
 [] graph drawing symposium 2007 http://www.cs.usyd.edu.au/~visual/gd2007/ (symposium drawing graph)
 [] JUNG - Java Universal Network/Graph Framework http://jung.sourceforge.net/index.html (visualization network graph java)
 [] prefuse | A Java-based toolkit for building interactive information visualization applications. http://prefuse.org/ (visualization java graph network)
 [] Graphviz http://www.graphviz.org/ (tools visualization graphics graph)
 [] GUESS: The Graph Exploration System http://graphexploration.cond.org/index.html (visualization network python java)
 [] Manageability - Open Source Graph or Network Visualization Written in Java http://www.manageability.org/blog/stuff/open-source-graph-network-visualization-in-java/view (java visualization graph graphics)
 [] Many Eyes http://services.alphaworks.ibm.com/manyeyes/app (visualization data collaboration chart)
 [] The InfoVis Toolkit http://ivtk.sourceforge.net/ (opensource visualization tools research)
 [] Welcome to JGraphT - a free Java Graph Library http://jgrapht.sourceforge.net/ (java library graph visualization)
 [] gratr graphs http://gratr.rubyforge.org/ (ruby visualization programming graphviz)
 [] MCL - an algorithm for clustering graphs http://micans.org/mcl/ (statistics tools algorithms datamining)
 [] A Periodic Table of Visualization Methods http://www.visual-literacy.org/periodic_table/periodic_table.html (visualization design reference table)
 [] Brad's Thoughts on the Social Graph http://bradfitz.com/social-graph-problem/ (openid socialgraph social socialnetworking)
 [] Developer's Guide - Google Chart API - Google Code http://code.google.com/apis/chart/ (google chart visualization api)
 [] Hypergraph - Hyperbolic graphs and trees : Home http://hypergraph.sourceforge.net/index.html (visualization hyperbolic graph java)
 [] flexvizgraphlib - Google Code http://code.google.com/p/flexvizgraphlib/ (visualization flex actionscript tree)
 [] Visualization http://www.cs.umd.edu/hcil/research/visualization.shtml (visualization research design interface)
 [] Perceptual Edge - Library http://www.perceptualedge.com/library.php (dashboard presentation charts powerpoint)
 [] RUMINT.org - A PVR for Network Traffic and Security Visualization http://www.rumint.org/ (visualization tools network monitoring)
 [] Treemaps for space-constrained visualization of hierarchies, by Ben Shneiderman http://www.cs.umd.edu/hcil/treemap-history/ (visualization algorithm mapping design)
 [] Rails Application Visualizer http://rav.rubyforge.org/ (rails ruby rubyonrails visualization)
 [] AT&T Labs Research - Yoix / YDAT http://www.yoix.org/ydat.html (tools graph visualization software)
 [] Gruff Graphs for Ruby | Ruby on Rails for Newbies http://nubyonrails.com/pages/gruff (ruby rails rubyonrails visualization)
 [] Quietly Scheming » Interactive Bubble Chart http://www.quietlyscheming.com/blog/charts/interactive-bubble-chart/ (visualization flex stats bubblechart)
 [] yEd - Java Graph Editor http://www.yworks.com/en/products_yed_about.htm (java graph visualization software)
 [] iPlots - High interaction graphics for R http://rosuda.org/iPlots/iplots.html (visualization statistics iplot r)
 [] AfterGlow Project Home http://afterglow.sourceforge.net/ (network analysis security visualization)
 [] John Goodall :: software http://userpages.umbc.edu/~jgood/vizsec/software/ (security visualization reference freesoftware)
 [] IHMC CmapTools - Download CmapTools http://cmap.ihmc.us/download/ (mapping map community concept)
 [] Tasty Data Goodies - Swivel http://swivel.com/ (statistics visualization chart interesting)
 [] Michael Feathers' Blog: Feature Diagrams for Java http://michaelfeathers.typepad.com/michael_feathers_blog/2007/02/feature_diagram.html (visualization diagram featurediagrams graphviz)
 [] JGraph - The Java Open Source Graph Drawing Component http://www.jgraph.com/jgraph.html (graph visualization java oss)
 [] Cacti: The Complete RRDTool-based Graphing Solution http://www.cacti.net/ (network monitoring linux sysadmin)
 [] VisIt Visualization Tool http://www.llnl.gov/visit/home.html (visualization graphics programming software)
 [] hackdiary: Using Omnigraffle to visualise Rails model associations http://www.hackdiary.com/archives/000093.html (rails visualization ruby rubyonrails)
 [] Function Grapher Online http://www.walterzorn.com/grapher/grapher_e.htm (math grapher tools javascript)
 [] The Structure of Information Networks (Jon Kleinberg) http://www.cs.cornell.edu/Courses/cs685/2007fa/ (network networks research complexity)
 [] GE-Graph for Google Earth http://www.sgrillo.net/googleearth/gegraph.htm (googleearth freeware grafic eina)
 [] Data Mining: Novel Graph Visualization http://datamining.typepad.com/data_mining/2006/10/novel_graph_vis.html (visualization graph datamining socialnetworks)
 [] SIMILE | Timeplot http://simile.mit.edu/timeplot/ (ajax chart javascript canvas)
 [] An Amazing Reading List on Information Networks! http://radar.oreilly.com/archives/2007/08/an_amazing_read_1.html (network architecture reference math)
 [] igvita.com » Blog Archive » Dynamic Stat Graphs in Rails http://www.igvita.com/blog/2007/01/05/dynamic-stat-graphs-in-rails/ (rails tutorial graphics gruff)
 [] [cs/0507053] Nonrepetitive Paths and Cycles in Graphs with Application to Sudoku http://arxiv.org/abs/cs.DS/0507053 (cs sudoku graph math)
 [] mike-love.net - Genealogy of Influence http://mike-love.net/ (history visualization philosophy maps)
 [] iVia Project http://ivia.ucr.edu/projects/planning/visual.shtml (tools guide visualization reference)
 [] MSRI - VMath - Streaming Video and Media Downloads - GGobi for Graphs. http://www.msri.org/communications/vmath/VMathVideos/VideoInfo/1960/show_video (towatch video lectures visualization)
 [] R Graph Gallery :: Home http://addictedtor.free.fr/graphiques/ (visualization statistics r graphics)
 [] Nathalie Henry http://insitu.lri.fr/~nhenry/PhD.html (tools graph visualization data)
 [] Small-world network - Wikipedia, the free encyclopedia http://en.wikipedia.org/wiki/Small-world_network (wikipedia network community graph)